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Cheap flights from Heraklion

From Heraklion (HER) you can currently reach 136 destinations across 49 countries. The cheapest fare right now is €16 to Athens. Fares below are sourced directly from our flight partners and reflect the latest available prices.

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Cheapest destinations from Heraklion

  1. AthensGreece
    GQ·0h 50m·Direct
    €16
  2. MilanItaly
    Ryanair·2h 55m·Direct
    €17
  3. PalermoItaly
    V7·2h·Direct
    €22
  4. RhodesGreece
    Aegean·1h·Direct
    €25
  5. BariItaly
    V7·1h 50m·Direct
    €27
  6. ParisFrance
    TO·3h 45m·Direct
    €28
  7. RomeItaly
    W4·2h 40m·Direct
    €29
  8. ThessalonikiGreece
    Ryanair·1h 20m·Direct
    €29
  9. MarseilleFrance
    GQ·3h 5m·Direct
    €30
  10. WarsawPoland
    W4·5h·1 stop
    €31
  11. ThiraGreece
    Aegean·0h 45m·Direct
    €32
  12. VilniusLithuania
    Wizz Air·4h·1 stop
    €32
  13. NaplesItaly
    V7·2h 5m·Direct
    €34
  14. LyonFrance
    easyJet·3h 10m·Direct
    €35
  15. BudapestHungary
    GQ·3h·1 stop
    €36
  16. ViennaAustria
    Ryanair·2h 35m·Direct
    €38
  17. MikonosGreece
    Aegean·0h 50m·Direct
    €39
  18. BolognaItaly
    MW·2h 35m·Direct
    €39
  19. IstanbulTurkiye
    Aegean·1h 35m·Direct
    €39
  20. LondonUnited Kingdom
    W4·5h 5m·1 stop
    €40
  21. KerkyraGreece
    Aegean·1h 20m·Direct
    €40
  22. GenevaSwitzerland
    DS·3h 10m·Direct
    €41
  23. GrazAustria
    XR·2h 40m·Direct
    €41
  24. LarnacaCyprus
    GQ·1h 25m·Direct
    €41
  25. BucharestRomania
    W4·1h 55m·Direct
    €43
  26. BarcelonaSpain
    W4·4h 45m·1 stop
    €43
  27. KrakowPoland
    W4·4h 55m·1 stop
    €44
  28. BratislavaSlovakia
    W4·4h 20m·1 stop
    €48
  29. BerlinGermany
    easyJet·3h 15m·Direct
    €49
  30. MaltaMalta
    W4·4h 20m·1 stop
    €49

Showing the 30 cheapest destinations. Open the map for the full list.

Cheapest month to fly from Heraklion

Lowest available fare from Heraklion departing each month, to any destination.

  • June 2026€17to Milan
  • July 2026€16to AthensCheapest
  • August 2026€30to Marseille
  • September 2026€40to Kerkyra
  • October 2026€78to Chania
  • November 2026€185to Riga

Fares shown are the lowest currently available for each month. Prices change frequently.

Flights from Heraklion by country

  • Germany
  • France
  • Spain
  • Italy
  • Greece
  • Netherlands
  • United Kingdom
  • Austria
  • Switzerland
  • Portugal
  • Croatia
  • Czech Republic
  • Hungary
  • Poland

Popular routes from Heraklion

  • Heraklion → Athensfrom €16
  • Heraklion → Thessalonikifrom €29
  • Heraklion → Thirafrom €32
  • Heraklion → Naplesfrom €34
  • Heraklion → Viennafrom €38
  • Heraklion → Bolognafrom €39
  • Heraklion → Genevafrom €41
  • Heraklion → Larnacafrom €41

Other popular origins

  • London (LHR)
  • Frankfurt
  • Vienna
  • Amsterdam
  • Athens
  • Thessaloniki
  • Rhodes
  • Santorini
  • Larnaca

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Frequently asked questions

How many destinations can I fly to from Heraklion?+
SkyHopp currently tracks 136 destinations across 49 countries from Heraklion Airport (HER). The list updates every few hours as our flight partners publish new fares.
What is the cheapest flight from Heraklion right now?+
At the moment, the cheapest observed fare is €16 to Athens. Prices change frequently, so we recommend booking as soon as the date works for you.
Does SkyHopp show direct flights from Heraklion?+
Yes. Use the "Direct only" filter on the interactive map to limit the results to non-stop flights from Heraklion.
Is it cheaper to fly from Heraklion on specific days?+
Mid-week departures (Tuesday–Thursday) and early-morning flights from Heraklion are usually the cheapest. Use the "Flexible dates" filter to let SkyHopp find the best day automatically.
What flights are available from Heraklion?+
From Heraklion Airport (HER), SkyHopp currently tracks flights to 136 destinations across 49 countries. Routes include both short-haul and longer-haul options operated by a mix of full-service and low-cost carriers. The full list of available flights from Heraklion with live fares is in the table above — updated regularly as our flight partners publish new availability.
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